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smarter stranded total rna seq kit v2 pico input mammalian  (TaKaRa)
96
TaKaRa smarter stranded total rna seq kit v2 pico input mammalian
SAHA rescues chromatin and transcriptomic changes (A) Outline of the experimental strategy. (B) PCA plot of ATAC-seq data obtained from four WT, five TS mice, and three TS-SAHA (TST). (C) PCA plot <t>of</t> <t>RNA-seq</t> data obtained from four WT and four TS mice and three TS-SAHA (TST). (D) Number of differentially accessible regions (DARs) for each comparison (left), and number of DARs in non-triplicated and triplicated genomic regions (right). (E) Number of differentially expressed genes (DEGs) for each comparison (left) and number of DEGs in non-triplicated and triplicated genomic regions (right). (F) Analysis of differentially accessible regions (DARs) in TS neurons and their rescue upon SAHA treatment, shown as line-plots (left) and Venn diagram (left). Kruskal-Wallis test followed by pairwise Wilcoxon tests with multiple-comparison correction, ∗∗∗ p < 0.001. (G) Analysis of differentially expressed genes (DEGs) in TS neurons and their rescue upon SAHA treatment, shown as line-plots (left) and Venn diagram (right). Kruskal-Wallis test followed by pairwise Wilcoxon tests with multiple-comparison correction, ∗∗∗ p < 0.001. (H) Heatmap of transcription factor motif enrichment among gained peaks in TS and TS-SAHA neurons, with significance and fold enrichment. (I) Gene set enrichment analysis of differentially expressed genes in TS (red) and TS-SAHA neurons (orange). See also .
Smarter Stranded Total Rna Seq Kit V2 Pico Input Mammalian, supplied by TaKaRa, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/seq/SMARTer+Stranded+Total+RNA-Seq+Kit+v2+-+Pico+Input+Mammalian/pmc13657111-22-0-11
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smarter stranded total rna seq kit v2 pico input mammalian - by Bioz Stars, 2026-10
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vahts universal v6 rna seq library prep kit for illumina  (Vazyme Biotech Co)
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Vazyme Biotech Co vahts universal v6 rna seq library prep kit for illumina
SAHA rescues chromatin and transcriptomic changes (A) Outline of the experimental strategy. (B) PCA plot of ATAC-seq data obtained from four WT, five TS mice, and three TS-SAHA (TST). (C) PCA plot <t>of</t> <t>RNA-seq</t> data obtained from four WT and four TS mice and three TS-SAHA (TST). (D) Number of differentially accessible regions (DARs) for each comparison (left), and number of DARs in non-triplicated and triplicated genomic regions (right). (E) Number of differentially expressed genes (DEGs) for each comparison (left) and number of DEGs in non-triplicated and triplicated genomic regions (right). (F) Analysis of differentially accessible regions (DARs) in TS neurons and their rescue upon SAHA treatment, shown as line-plots (left) and Venn diagram (left). Kruskal-Wallis test followed by pairwise Wilcoxon tests with multiple-comparison correction, ∗∗∗ p < 0.001. (G) Analysis of differentially expressed genes (DEGs) in TS neurons and their rescue upon SAHA treatment, shown as line-plots (left) and Venn diagram (right). Kruskal-Wallis test followed by pairwise Wilcoxon tests with multiple-comparison correction, ∗∗∗ p < 0.001. (H) Heatmap of transcription factor motif enrichment among gained peaks in TS and TS-SAHA neurons, with significance and fold enrichment. (I) Gene set enrichment analysis of differentially expressed genes in TS (red) and TS-SAHA neurons (orange). See also .
Vahts Universal V6 Rna Seq Library Prep Kit For Illumina, supplied by Vazyme Biotech Co, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/seq/VAHTS+Universal+V8+RNA-seq+Library+Prep+Kit+for+Illumina/pmc13655489-268-11-20
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vahts universal v6 rna seq library prep kit for illumina - by Bioz Stars, 2026-10
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ion total rna seq kit v2  (Thermo Fisher)
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Thermo Fisher ion total rna seq kit v2
SAHA rescues chromatin and transcriptomic changes (A) Outline of the experimental strategy. (B) PCA plot of ATAC-seq data obtained from four WT, five TS mice, and three TS-SAHA (TST). (C) PCA plot <t>of</t> <t>RNA-seq</t> data obtained from four WT and four TS mice and three TS-SAHA (TST). (D) Number of differentially accessible regions (DARs) for each comparison (left), and number of DARs in non-triplicated and triplicated genomic regions (right). (E) Number of differentially expressed genes (DEGs) for each comparison (left) and number of DEGs in non-triplicated and triplicated genomic regions (right). (F) Analysis of differentially accessible regions (DARs) in TS neurons and their rescue upon SAHA treatment, shown as line-plots (left) and Venn diagram (left). Kruskal-Wallis test followed by pairwise Wilcoxon tests with multiple-comparison correction, ∗∗∗ p < 0.001. (G) Analysis of differentially expressed genes (DEGs) in TS neurons and their rescue upon SAHA treatment, shown as line-plots (left) and Venn diagram (right). Kruskal-Wallis test followed by pairwise Wilcoxon tests with multiple-comparison correction, ∗∗∗ p < 0.001. (H) Heatmap of transcription factor motif enrichment among gained peaks in TS and TS-SAHA neurons, with significance and fold enrichment. (I) Gene set enrichment analysis of differentially expressed genes in TS (red) and TS-SAHA neurons (orange). See also .
Ion Total Rna Seq Kit V2, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/seq/nct04488614-6-19-24
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ion total rna seq kit v2 - by Bioz Stars, 2026-10
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mcfdna seq  (Karius Inc)
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Karius Inc mcfdna seq
SAHA rescues chromatin and transcriptomic changes (A) Outline of the experimental strategy. (B) PCA plot of ATAC-seq data obtained from four WT, five TS mice, and three TS-SAHA (TST). (C) PCA plot <t>of</t> <t>RNA-seq</t> data obtained from four WT and four TS mice and three TS-SAHA (TST). (D) Number of differentially accessible regions (DARs) for each comparison (left), and number of DARs in non-triplicated and triplicated genomic regions (right). (E) Number of differentially expressed genes (DEGs) for each comparison (left) and number of DEGs in non-triplicated and triplicated genomic regions (right). (F) Analysis of differentially accessible regions (DARs) in TS neurons and their rescue upon SAHA treatment, shown as line-plots (left) and Venn diagram (left). Kruskal-Wallis test followed by pairwise Wilcoxon tests with multiple-comparison correction, ∗∗∗ p < 0.001. (G) Analysis of differentially expressed genes (DEGs) in TS neurons and their rescue upon SAHA treatment, shown as line-plots (left) and Venn diagram (right). Kruskal-Wallis test followed by pairwise Wilcoxon tests with multiple-comparison correction, ∗∗∗ p < 0.001. (H) Heatmap of transcription factor motif enrichment among gained peaks in TS and TS-SAHA neurons, with significance and fold enrichment. (I) Gene set enrichment analysis of differentially expressed genes in TS (red) and TS-SAHA neurons (orange). See also .
Mcfdna Seq, supplied by Karius Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/seq/mcfdna+seq/pm41780551-70-29-42
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mcfdna seq - by Bioz Stars, 2026-10
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nebnext ultra ii directional rna seq kit  (New England Biolabs)
99
New England Biolabs nebnext ultra ii directional rna seq kit
SAHA rescues chromatin and transcriptomic changes (A) Outline of the experimental strategy. (B) PCA plot of ATAC-seq data obtained from four WT, five TS mice, and three TS-SAHA (TST). (C) PCA plot <t>of</t> <t>RNA-seq</t> data obtained from four WT and four TS mice and three TS-SAHA (TST). (D) Number of differentially accessible regions (DARs) for each comparison (left), and number of DARs in non-triplicated and triplicated genomic regions (right). (E) Number of differentially expressed genes (DEGs) for each comparison (left) and number of DEGs in non-triplicated and triplicated genomic regions (right). (F) Analysis of differentially accessible regions (DARs) in TS neurons and their rescue upon SAHA treatment, shown as line-plots (left) and Venn diagram (left). Kruskal-Wallis test followed by pairwise Wilcoxon tests with multiple-comparison correction, ∗∗∗ p < 0.001. (G) Analysis of differentially expressed genes (DEGs) in TS neurons and their rescue upon SAHA treatment, shown as line-plots (left) and Venn diagram (right). Kruskal-Wallis test followed by pairwise Wilcoxon tests with multiple-comparison correction, ∗∗∗ p < 0.001. (H) Heatmap of transcription factor motif enrichment among gained peaks in TS and TS-SAHA neurons, with significance and fold enrichment. (I) Gene set enrichment analysis of differentially expressed genes in TS (red) and TS-SAHA neurons (orange). See also .
Nebnext Ultra Ii Directional Rna Seq Kit, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/seq/NEBNext+Ultra+II+Directional+RNA+Library+Prep+Kit+for+Illumina/pmc13656818-96-7-7
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nebnext ultra ii directional rna seq kit - by Bioz Stars, 2026-10
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rna seq analysis  (Qiagen)
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Qiagen rna seq analysis
SAHA rescues chromatin and transcriptomic changes (A) Outline of the experimental strategy. (B) PCA plot of ATAC-seq data obtained from four WT, five TS mice, and three TS-SAHA (TST). (C) PCA plot <t>of</t> <t>RNA-seq</t> data obtained from four WT and four TS mice and three TS-SAHA (TST). (D) Number of differentially accessible regions (DARs) for each comparison (left), and number of DARs in non-triplicated and triplicated genomic regions (right). (E) Number of differentially expressed genes (DEGs) for each comparison (left) and number of DEGs in non-triplicated and triplicated genomic regions (right). (F) Analysis of differentially accessible regions (DARs) in TS neurons and their rescue upon SAHA treatment, shown as line-plots (left) and Venn diagram (left). Kruskal-Wallis test followed by pairwise Wilcoxon tests with multiple-comparison correction, ∗∗∗ p < 0.001. (G) Analysis of differentially expressed genes (DEGs) in TS neurons and their rescue upon SAHA treatment, shown as line-plots (left) and Venn diagram (right). Kruskal-Wallis test followed by pairwise Wilcoxon tests with multiple-comparison correction, ∗∗∗ p < 0.001. (H) Heatmap of transcription factor motif enrichment among gained peaks in TS and TS-SAHA neurons, with significance and fold enrichment. (I) Gene set enrichment analysis of differentially expressed genes in TS (red) and TS-SAHA neurons (orange). See also .
Rna Seq Analysis, supplied by Qiagen, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/seq/miRNeasy+Mini+Kit/pmc13651848-272-1-12
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vahts universal v8 rna seq library prep kit for illumina  (Vazyme Biotech Co)
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Vazyme Biotech Co vahts universal v8 rna seq library prep kit for illumina
Combining poly(A)+-selected and <t>rRNA-depleted</t> <t>RNA-seq</t> with manual re-annotation reclassified 423 Fumigati section-specific genes ( ssp ), revealing widespread non-coding ssp genes. Functional analyses identified two lncRNAs: SSP7 supports mitochondrial function by maintaining translation of pprA mRNA, whereas SSP8 interacts with amino acid-related proteins to regulate amino acid metabolism. Together, these lncRNA-mediated pathways promote fungal development and virulence. Created in BioRender. Zhang, Y. (2026) https://BioRender.com/47wpmko .
Vahts Universal V8 Rna Seq Library Prep Kit For Illumina, supplied by Vazyme Biotech Co, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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nebnext em seq kit  (Twist Bioscience)
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Combining poly(A)+-selected and <t>rRNA-depleted</t> <t>RNA-seq</t> with manual re-annotation reclassified 423 Fumigati section-specific genes ( ssp ), revealing widespread non-coding ssp genes. Functional analyses identified two lncRNAs: SSP7 supports mitochondrial function by maintaining translation of pprA mRNA, whereas SSP8 interacts with amino acid-related proteins to regulate amino acid metabolism. Together, these lncRNA-mediated pathways promote fungal development and virulence. Created in BioRender. Zhang, Y. (2026) https://BioRender.com/47wpmko .
Nebnext Em Seq Kit, supplied by Twist Bioscience, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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rna seq  (Plasmidsaurus)
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Combining poly(A)+-selected and <t>rRNA-depleted</t> <t>RNA-seq</t> with manual re-annotation reclassified 423 Fumigati section-specific genes ( ssp ), revealing widespread non-coding ssp genes. Functional analyses identified two lncRNAs: SSP7 supports mitochondrial function by maintaining translation of pprA mRNA, whereas SSP8 interacts with amino acid-related proteins to regulate amino acid metabolism. Together, these lncRNA-mediated pathways promote fungal development and virulence. Created in BioRender. Zhang, Y. (2026) https://BioRender.com/47wpmko .
Rna Seq, supplied by Plasmidsaurus, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


SAHA rescues chromatin and transcriptomic changes (A) Outline of the experimental strategy. (B) PCA plot of ATAC-seq data obtained from four WT, five TS mice, and three TS-SAHA (TST). (C) PCA plot of RNA-seq data obtained from four WT and four TS mice and three TS-SAHA (TST). (D) Number of differentially accessible regions (DARs) for each comparison (left), and number of DARs in non-triplicated and triplicated genomic regions (right). (E) Number of differentially expressed genes (DEGs) for each comparison (left) and number of DEGs in non-triplicated and triplicated genomic regions (right). (F) Analysis of differentially accessible regions (DARs) in TS neurons and their rescue upon SAHA treatment, shown as line-plots (left) and Venn diagram (left). Kruskal-Wallis test followed by pairwise Wilcoxon tests with multiple-comparison correction, ∗∗∗ p < 0.001. (G) Analysis of differentially expressed genes (DEGs) in TS neurons and their rescue upon SAHA treatment, shown as line-plots (left) and Venn diagram (right). Kruskal-Wallis test followed by pairwise Wilcoxon tests with multiple-comparison correction, ∗∗∗ p < 0.001. (H) Heatmap of transcription factor motif enrichment among gained peaks in TS and TS-SAHA neurons, with significance and fold enrichment. (I) Gene set enrichment analysis of differentially expressed genes in TS (red) and TS-SAHA neurons (orange). See also .

Journal: iScience

Article Title: HDAC inhibitor treatment restores transcriptome, chromatin accessibility, and memory deficits in a mouse model for Down syndrome

doi: 10.1016/j.isci.2026.117670

Figure Lengend Snippet: SAHA rescues chromatin and transcriptomic changes (A) Outline of the experimental strategy. (B) PCA plot of ATAC-seq data obtained from four WT, five TS mice, and three TS-SAHA (TST). (C) PCA plot of RNA-seq data obtained from four WT and four TS mice and three TS-SAHA (TST). (D) Number of differentially accessible regions (DARs) for each comparison (left), and number of DARs in non-triplicated and triplicated genomic regions (right). (E) Number of differentially expressed genes (DEGs) for each comparison (left) and number of DEGs in non-triplicated and triplicated genomic regions (right). (F) Analysis of differentially accessible regions (DARs) in TS neurons and their rescue upon SAHA treatment, shown as line-plots (left) and Venn diagram (left). Kruskal-Wallis test followed by pairwise Wilcoxon tests with multiple-comparison correction, ∗∗∗ p < 0.001. (G) Analysis of differentially expressed genes (DEGs) in TS neurons and their rescue upon SAHA treatment, shown as line-plots (left) and Venn diagram (right). Kruskal-Wallis test followed by pairwise Wilcoxon tests with multiple-comparison correction, ∗∗∗ p < 0.001. (H) Heatmap of transcription factor motif enrichment among gained peaks in TS and TS-SAHA neurons, with significance and fold enrichment. (I) Gene set enrichment analysis of differentially expressed genes in TS (red) and TS-SAHA neurons (orange). See also .

Article Snippet: SMARTer Stranded Total RNA-Seq Kit v2 - Pico Input Mammalian , Takara , Cat#634411.

Techniques: RNA Sequencing, Comparison, Analysis

Journal: iScience

Article Title: HDAC inhibitor treatment restores transcriptome, chromatin accessibility, and memory deficits in a mouse model for Down syndrome

doi: 10.1016/j.isci.2026.117670

Figure Lengend Snippet:

Article Snippet: SMARTer Stranded Total RNA-Seq Kit v2 - Pico Input Mammalian , Takara , Cat#634411.

Techniques: Cell-Signaling, Recombinant, Bicinchoninic Acid Protein Assay, Isolation, DNA Library Preparation, Software, Analysis

Combining poly(A)+-selected and rRNA-depleted RNA-seq with manual re-annotation reclassified 423 Fumigati section-specific genes ( ssp ), revealing widespread non-coding ssp genes. Functional analyses identified two lncRNAs: SSP7 supports mitochondrial function by maintaining translation of pprA mRNA, whereas SSP8 interacts with amino acid-related proteins to regulate amino acid metabolism. Together, these lncRNA-mediated pathways promote fungal development and virulence. Created in BioRender. Zhang, Y. (2026) https://BioRender.com/47wpmko .

Journal: PLOS Pathogens

Article Title: Large-scale genome re-annotation uncovers pathogen-specific lncRNA regulators of fungal growth and virulence

doi: 10.1371/journal.ppat.1014681

Figure Lengend Snippet: Combining poly(A)+-selected and rRNA-depleted RNA-seq with manual re-annotation reclassified 423 Fumigati section-specific genes ( ssp ), revealing widespread non-coding ssp genes. Functional analyses identified two lncRNAs: SSP7 supports mitochondrial function by maintaining translation of pprA mRNA, whereas SSP8 interacts with amino acid-related proteins to regulate amino acid metabolism. Together, these lncRNA-mediated pathways promote fungal development and virulence. Created in BioRender. Zhang, Y. (2026) https://BioRender.com/47wpmko .

Article Snippet: Libraries were then prepared using the VAHTS Universal V8 RNA-seq Library Prep Kit for Illumina (NR605, Vazyme) according to the manufacturer’s instructions.

Techniques: RNA Sequencing, Functional Assay